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  3. Vol. 12 (2021): Continues Volume
  4. Original Article

Vol. 12 (2021)

Bahman 2021

Developing a New Dimension for Fourier Domain Optical Coherence Tomography Images by Simultaneous Measurement of the Refractive Index and Thickness True Physical Thickness Optical Coherence Tomography

  • Ahmad Amjadi
  • Hamed Ghodsi
  • Salile Khandani
  • Bahareh Khishkhah
  • Payman Rajai
  • Mohammadreza Razzaghi

Journal of Lasers in Medical Sciences, Vol. 12 (2021), 13 Bahman 2021 , Page e89
Published: 2021-12-29

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Abstract

Introduction: Fourier domain Optical coherence tomography (OCT) is a widely used highresolution optical imaging technique. It is useful for various applications in medical imaging, such as ophthalmology (e.g. retinal imaging for diagnosing complications like glaucoma or macular degeneration), dermatology, oncology, and cardiology. The ability to noninvasively measure both the refractive index and thickness of biological tissues could have various medical applications and enable earlier disease detection. For example, observing changes in the refractive index can help distinguish between tissues with normal or abnormal function.
Methods: In this study, the theoretical framework for simultaneous measurement of the refractive index and physical thickness of multilayer systems is proposed and tested for two different samples, each having three layers, a glass/NaCl solution/glass sample and a glass/sugar solution/glass sample. The whole signal processing procedure and the experimental setup are described.
Results: The refractive index and thickness of saltwater and sugar water samples in the Fourierdomain OCT (FD-OCT) system were obtained. The resulting data were compared with reference measurements and showed a deviation of about 1% for the samples.
Conclusion: We tested the proposed framework for the simultaneous extraction of the refractive index and thickness of multilayer systems of salt water and sugar water from its FD-OCT data. We showed that the measured parameters were in agreement with reference amounts.

DOI: 10.34172/jlms.2021.89

Keywords:
  • Optical coherence tomography
  • Refractive index
  • Fourier domain OCT
  • Medical imaging
  • Ophthalmology
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How to Cite

Amjadi, A., Ghodsi , H., Khandani , S. ., Khishkhah, B., Rajai, P. ., & Razzaghi, M. . (2021). Developing a New Dimension for Fourier Domain Optical Coherence Tomography Images by Simultaneous Measurement of the Refractive Index and Thickness: True Physical Thickness Optical Coherence Tomography. Journal of Lasers in Medical Sciences, 12, e89. Retrieved from https://journals.sbmu.ac.ir/jlms/article/view/36017
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References

Fercher AF, Drexler W, Hitzenberger CK, Lasser T. Optical coherence tomography - principles and applications. Rep Prog Phys. 2003;66(2):239-303. doi:10.1088/0034-4885/66/2/204

Lu Y, Li Z, Zhang X, Ming B, Jia J, Wang R, et al. Retinal nerve fiber layer structure abnormalities in early Alzheimer’s disease: evidence in optical coherence tomography. Neurosci Lett. 2010;480(1):69-72. doi: 10.1016/j.neulet.2010.06.006

Akil H, Al-Sheikh M, Falavarjani KG, Francis B, Chopra V. Choroidal thickness and structural glaucoma parameters in glaucomatous, preperimetric glaucomatous, and healthy eyes using swept-source OCT. Eur J Ophthalmol. 2017;27(5):548-554. doi:10.5301/ejo.5000926

Ghasemi Falavarjani K, Iafe NA, Hubschman J-P, Tsui I, Sadda SR, Sarraf D. Optical coherence tomography angiography analysis of the foveal avascular zone and macular vessel density after anti-VEGF therapy in eyes with diabetic macular edema and retinal vein occlusion. Invest Ophthalmol Vis Sci. 2017;58(1):30-34. doi:10.1167/iovs.16-20579

Soltan Sanjari M, Parvaresh MM, Maleki A, Ghasemi Falavarjani KH, Bakhtiari P. Correlation between nerve fiber layer thickness on OCT and visual field in patients with optic atrophy. Bina J Ophthalm. 2008;13(3):331-335.

de Boer JF, Hitzenberger CK, Yasuno Y. Polarization sensitive optical coherence tomography - a review [Invited]. Biomed Opt Express. 2017;8(3):1838-1873. doi:10.1364/BOE.8.001838

Kolenderska S, Vanholsbeeck F, Kolenderski P. Quantum Optical Coherence Tomography using two-photon joint spectrum detection. Opt Express. 2020 ;28(20):29576-89. doi:10.1364/oe.399913

Jin J, Kim JW, Kang C-S, Kim J-A, Eom TB. Thickness and refractive index measurement of a silicon wafer based on an optical comb. Opt Express. 2010;18(17):18339. doi:10.1364/oe.18.018339

Na J, Choi HY, Choi ES, Lee C, Lee BH. Self-referenced spectral interferometry for simultaneous measurements of thickness and refractive index. Appl Opt. 2009;48(13):2461-2467. doi:10.1364/ao.48.002461

Leitgeb R, Hitzenberger C, Fercher A. Performance of fourier domain vs. time domain optical coherence tomography. Opt Express. 2003;11(8):889-894. doi:10.1364/oe.11.000889

Yun S, Tearney G, de Boer J, Iftimia N, Bouma B. High-speed optical frequency-domain imaging. Opt Express. 2003;11(22):2953-2963. doi:10.1364/oe.11.002953

Tahara S, Bezerra HG, Baibars M, Kyono H, Wang W, Pokras S, et al. In vitro validation of new Fourier-domain optical coherence tomography. EuroIntervention. 2011;6(7):875-882. doi:10.4244/EIJV6I7A149

Bouma BE, Yun S-H, Vakoc BJ, Suter MJ, Tearney GJ. Fourier-domain optical coherence tomography: recent advances toward clinical utility. Curr Opin Biotechnol. 2009;20(1):111-118. doi: 10.1016/j.copbio.2009.02.007

Yang Z, Tatham AJ, Zangwill LM, Weinreb RN, Zhang C, Medeiros FA. Diagnostic ability of retinal nerve fiber layer imaging by swept-source optical coherence tomography in glaucoma. Am J Ophthalmol. 2015;159(1):193-201. doi: 10.1016/j.ajo.2014.10.019

Potsaid B, Baumann B, Huang D, Barry S, Cable AE, Schuman JS, et al. Ultrahigh speed 1050nm swept source/Fourier domain OCT retinal and anterior segment imaging at 100,000 to 400,000 axial scans per second. Opt Express. 2010;18(19):20029-20048. doi:10.1364/OE.18.020029

Choma M, Sarunic M, Yang C, Izatt J. Sensitivity advantage of swept source and Fourier domain optical coherence tomography. Opt Express. 2003;11(18):2183-2189. doi:10.1364/oe.11.002183

Rajai P, Schriemer H, Amjadi A, Munger R. Simultaneous measurement of refractive index and thickness of multilayer systems using Fourier domain optical coherence tomography, part 2: implementation. J Biomed Opt. 2017;22(1):15003. doi: 10.1117/1.JBO.22.1.015003

Schmitt JM. Optical coherence tomography (OCT): a review. IEEE J Sel Top Quantum Electron. 1999;5(4):1205-1215. doi:10.1109/2944.796348

Zlokolica V, Jovanov L, Pižurica A, De Keyser P, Dhaenens F, Philips W. Wavelet-based denoising for 3D OCT images. Proc. SPIE 6696, Applications of Digital Image Processing XXX; 8 October 2007; San Diego, California, United States. doi: 10.1117/12.734286

Gelikonov GV, Gelikonov VM, Shilyagin PA. Linear wave-number spectrometer for spectral domain optical coherence tomography. Proc. SPIE 6847, Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine XII; 18 February 2008; San Jose, California, United States. doi:10.1117/12.763541

Chan KKH, Tang S. High-speed spectral domain optical coherence tomography using non-uniform fast Fourier transform. Biomed Opt Express. 2010;1(5):1309-1319. doi:10.1364/BOE.1.001309

Leitgeb RA, Drexler W, Unterhuber A, Hermann B, Bajraszewski T, Le T, et al. Ultrahigh resolution Fourier domain optical coherence tomography. Opt Express. 2004;12(10):2156-2165. doi:10.1364/opex.12.002156

Dorrer, C, Belabas, N, Likforman, J, Joffre, M. Spectral resolution and sampling issues in Fourier-transform spectral interferometry. J Opt Soc Am B. 2000; 17(10):1795-1802. doi:10.1364/JOSAB.17.001795

Shin S, Sharma U, Tu H, Jung, W. Boppart S. Characterization and Analysis of Relative Intensity Noise in Broadband Optical Sources for Optical Coherence Tomography. IEEE Photonics Technol Lett. 2010; 22(14):1057-1059. doi:10.1109/LPT.2010.2050058

Moon S, Lee S, Chen Z. Reference spectrum extraction and fixed-pattern noise removal in optical coherence tomography. Opt Express. 2010; 18(24): 24395-404. doi:10.1364/OE.18.024395

Bashkansky M, Reintjes J. Statistics and reduction of speckle in optical coherence tomography. Opt Lett. 2000;25(8): 545-7. doi:10.1364/OL.25.000545

Li M, Idoughi R, Choudhury B, Heidrich, W. Statistical model for OCT image denoising. Biomed Opt Express. 2017; 8(9): 3903-17. doi:10.1364/BOE.8.003903

Wu Y, Tracey B, Natarajan P, Noonan J. James–Stein Type Center Pixel Weights for Non-Local Means Image Denoising. IEEE Signal Process Lett. 2013; 20(4): 411-414. doi:10.1109/LSP.2013.2247755

Leitgeb R, Hitzenberger C, Fercher A, Bajraszewski T. Phase-shifting algorithm to achieve high-speed long-depth-range probing by frequency-domain optical coherence tomography. Optics Lett. 2003; 28(22): 2201-4. doi:10.1364/OL.28.002201

Adhi M, Duker J. Optical coherence tomography – current and future applications. Curr Opin Ophthalmol. 2013;24(3): 213-221. doi: 10.1097/ICU.0b013e32835f8bf8

Gambichler T, Moussa G, Sand M, Sand D, Altmeyer P, Hoffmann K. Applications of optical coherence tomography in dermatology. J Dermatol Sci. 2005 40(2): 85-94. doi:10.1016/j.jdermsci.2005.07.006

Fujimoto J, Drexler W, Schuman J, Hitzenberger, C. Optical Coherence Tomography (OCT) in Ophthalmology: Introduction. Opt Express. 2009;17(5): 3978-9. doi:10.1364/oe.17.003978

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